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Which MOPEX modules should be turned on in the namelist for various outlier rejection options?
Posted by IRSA HelpDesk on 11 March 2013 02:01 PM
For Single Frame Outlier Rejection, the following should be included (set to 1 in the namelist):
MedFilter (run_medfilter = 1)
Detect RadHit (run_detect_radhit = 1)

For Multiframe Temporal Outlier Rejection the following should be included (set to 1 in the namelist):
Mosaic Outlier (run_mosaic_outlier = 1)
Check the "Use Outlier for Rmask" box in the Mosaic RMask module (USE_OUTLIER_FOR_RMASK = 1)

For Dual Outlier Rejection the following should be included (set to 1 in the namelist):
MedFilter (run_medfilter = 1)
Detect Outlier (run_detect_outlier = 1)
Mosaic Projection (run_mosaic_proj = 1)
Mosaic Dual Outlier (run_mosaic_dual_outlier = 1)
Level (run_level = 1)
Check the "Use Dual Outlier for Rmask" box in the Mosaic RMask module (USE_DUAL_OUTLIER_FOR_RMASK = 1)

For Box Outlier Rejection, the following should be included (set to 1 in the namelist):
Mosaic Box Outlier (run_mosaic_box_outlier = 1)
Check the "Use Box Outlier for Rmask" box in the Mosaic Rmask module (USE_BOX_OUTLIER_FOR_RMASK = 1)

Interpolated images are required for multiframe and dual outlier rejection. The following module should be run once before running Mosaic RMask:
Mosaic Coverage (run_mosaic_covg = 1)

Note that you also need to ensure that your RMask Fatal Bit Pattern is set to use the results from your outlier rejection method. This is set in the Initial Settings module in the GUI, under Optional Input and Mask Files. In the namelist the Fatal Bit Pattern is set with the keyword
RMask_Fatal_BitPattern = <desired fatal bit pattern>

See the MOPEX User's Guide for more information on outlier rejection schemes and fatal bit patterns.
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